The real catalog of tools for AI agents

PubTator 3 MCP — biomedical entity search, literature search with entity

PubMed biomedical papers: new research daily. $0.01/query. Register in-session — free testnet funds.

Access 30+ bioinformatics tools from 14 databases.

Search biomedical papers, inspect publication records, and traverse citation or semantic graphs.

Bioinformatics MCP for genomic variant interpretation, gene-disease evidence and literature.

Bioinformatics and genomic sequence parser for clinical research.

Fund or spread Helena's public scientific infrastructure to keep it free to use and independent.

Official answers about Helena Bioinformatics and its products, with citations to public sources.

Search biomedical literature, get article details, find related articles, and explore MeSH terms

PubMed MCP — wraps the NCBI E-utilities API (biomedical literature, free, no auth)

Multi-source biomedical literature search: PubMed, Europe PMC, OpenAlex, full text, citations

Search PubMed biomedical literature and fetch article summaries. No key required.

Search 36M+ PubMed biomedical articles and ClinicalTrials.gov studies.

MCP server for Galaxy bioinformatics platform - connect, execute tools, and manage workflows

MyGene.info gene annotation API.

Run real bioinformatics from your AI agent. Reliable, reproducible, on your own GPUs.

Biomedical data: compounds, drug info, and molecular targets

LLM-assisted biomedical literature screening and extraction for PubMed, GEO, and preprints.

Find open biology and chemistry AI models, bioinformatics tools and databases, and run them online.

Look up genes, sequences, variants, homologs, and cross-database xrefs from Ensembl REST.