The real catalog of tools for AI agents

Protein domains from InterPro. No key required.

Search InterPro entries, map protein domains and functional sites, and find proteins by domain.

UniProt MCP — protein sequence + function database.

MCP server for Galaxy bioinformatics platform - connect, execute tools, and manage workflows

Protein sequences, names, and functions from UniProt. No key required.

InterPro MCP (EBI) — protein family / domain / functional-site classification.

MCP Server for 3D protein structural data retrieval & analysis from RCSB PDB, PDBe, and UniProt.

Access 30+ bioinformatics tools from 14 databases.

Hosted DNA/RNA/protein tools: primers, oligos, PCR, cloning, CRISPR, alignment, batch & pipelines.

STRING-DB MCP — protein-protein interaction networks.

AlphaFold DB MCP — predicted protein structures.

Bioinformatics and genomic sequence parser for clinical research.

Look up protein structures and search the RCSB Protein Data Bank. No key required.

Run protein folding, docking, design and sequence analysis tools, and read their results.

Bioinformatics MCP for genomic variant interpretation, gene-disease evidence and literature.

Human Protein Atlas (HPA) MCP — keyless.

Premium agentic endpoint for cross-modal-embedding-aligner-mcp.

Run real bioinformatics from your AI agent. Reliable, reproducible, on your own GPUs.

Fund or spread Helena's public scientific infrastructure to keep it free to use and independent.

Find open biology and chemistry AI models, bioinformatics tools and databases, and run them online.